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AAT Bioquest/Cyber Orange™ Nucleic Acid Gel Stain *10,000X DMSO Solution*/17595/1 ml
Overview | PrinterFriendlyVersion |
Ex/Em(nm) | 495/540 |
MW | N/A |
CAS# | N/A |
Solvent | N/A |
Storage | F/D/L |
Category | NucleicAcidDetection DNADetection |
Related | LabelingCells FluorescenceImaging BiochemicalAssays |
1.Post-stainingProtocol
1.1Rungelsbasedonyourstandardprotocol.
1.2Make1XCyberOrange™workingsolutionbydilutingthe10,000XstockreagentintoPH7.5-8buffer (e.g.,TAE,TBEorTEpreferablypH8.0).
Note:Stainingsolutionspreparedinwaterarelessstablethanthosepreparedinbufferandmustbeusedwithin24hourstoensuremaximalstainingsensitivity.Inaddition,stainingsolutionspreparedinbufferswithpHbelowabout7.5orabove8.0arelessstableandshowreducedstainingefficacy.
1.3Placethegelinasuitablepolypropylenecontainer.Gentlyaddasufficientamountofthe1Xstainingsolutionto submergethegel.
Note:Donotuseaglasscontainer,asitwilladsorbmuchofthedyeinthestainingsolution.
1.4Agitatethegelgentlyatroomtemperaturefor~30minutes,protectingfromthelight.
Note:Thestainingsolutionmaybestoredinthedark(preferablyrefrigerated)foraweekandreusedupto2-3times.
1.5Imagethegelwitha300nmultravioletor254nmtransIlluminator,oralaser-basedgelscannerusingalongpathgreenfiltersuchasaSYBR®filterorGelStar®filter.
2.Pre-castingprotocol
2.1Prepareagarosegelsolutionusingyourstandardprotocol.
2.2Dilutethe10,000XCyberOrange™stockreagentintothegelsolutionat
1:10,000justpriortopouringthe gelandmixthoroughly.
2.3Rungelsbasedonyourstandardprotocol.
2.4Imagethegelwitha300nmultravioletor254nmtransilluminator,oralaser-based
gelscannerusingalongpathgreenfiltersuchasaSYBR®filterorGelStar®filter.
References&Citations | PrinterFriendlyVersion |
1. LiuQ,YangZ,HaoH,ChengS,FanW,DuE,XiaoS,WangX,ZhangS.(2014)DevelopmentofaSYBRGreenreal-timeRT-PCRassayforthedetectionofavianencephalomyelitisvirus.JVirolMethods,206C,46.
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3. RameshKumarD,SanjukthaM,RajanJJ,AnandaBharathiR,SantiagoTC,AlavandiSV,PoornimaM.(2014)DevelopmentofSYBRGreenbasedrealtimePCRassayfordetectionofmonodonbaculovirusinPenaeusmonodon.JVirolMethods,205C,81.
4. ValiZ,RazA,BokharaeiH,NabaviM,BemanianMH,YazdiMS,DjADIdND.(2014)DevelopmentofaHigh-resolutionMeltingAnalysisMethodBasedonSYBRGreen-Iforrs7216389LocusGenotypinginAsthmaticChildPatients.AvicennaJMedBiotechnol,6,72.
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9. AnthonyJohnsonAM,DasguptaI,SaiGopalDV.(2014)Developmentofloop-mediatedisothermalamplificationandSYBRgreenreal-timePCRmethodsforthedetectionofCitrusyellowmosaicbadnavirusincitrusspecies.JVirolMethods,203,9.
10. Dubot-PeresA,TanCY,deChesseR,SibounheuangB,VongsouvathM,PhommasoneK,BessaudM,GazinC,ThirionL,PhetsouvanhR,NewtonPN,deLamballerieX.(2014)SYBRgreenreal-timePCRforthedetectionofallenterovirus-A71genogroups.PLoSOne,9,e89963.